print.permTestResults: Print permTestResults objects

In regioneR: Association analysis of genomic regions based on permutation tests

Description

Print permTestResults objects

Usage

## S3 method for class 'permTestResults'
print(x, ...)

Value

the object is printed

Examples

genome <- filterChromosomes(getGenome("hg19"), keep.chr="chr1")
A <- createRandomRegions(nregions=20, length.mean=10000000, length.sd=20000, genome=genome, non.overlapping=FALSE) 
B <- c(A, createRandomRegions(nregions=10, length.mean=10000, length.sd=20000, genome=genome, non.overlapping=FALSE))

pt <- permTest(A=A, B=B, ntimes=10, alternative="auto", verbose=TRUE, genome=genome, evaluate.function=meanDistance, randomize.function=randomizeRegions, non.overlapping=FALSE)
print(pt)

regioneR documentation built on Nov. 8, 2020, 5 p.m.