Get the proportion of clusters over a specified quality threshold

Description

Return the ratio of clusters with a quality score less than or equal to a specified value (n) for the requested lanes and cycles.

Usage

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clusterQualityGtN(project, lane, cycle, n)

## S4 method for signature 'savProject,integer,integer,integer'
clusterQualityGtN(project, lane,
  cycle, n = 30L)

Arguments

project

SAV project

lane

lane(s) number

cycle

cycle(s) number

n

quality threshold

Examples

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## Not run: 
example(savR)
clusterQualityGtN(fc, 1L, 25L, 30L)

## End(Not run)

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