scHOT_stripOutput: scHOT_stripOutput

Description Usage Arguments Value Examples

View source: R/build.R

Description

Strip the scHOT output

Usage

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scHOT_stripOutput(scHOT, force = TRUE, store = FALSE, file_name = NULL)

Arguments

scHOT

A scHOT object

force

A logical indicates whther forcing stripping the scHOT output

store

A logical flag on whether the scHOT should be stored as .rds file

file_name

A string indicates the file name of the scHOT will be stored

Value

A scHOT object with scHOT_output striped

Examples

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data(MOB_subset)
sce_MOB_subset <- MOB_subset$sce_MOB_subset
scHOT_spatial <- scHOT_buildFromSCE(sce_MOB_subset,
                                     assayName = "logcounts",
                                    positionType = "spatial",
                                     positionColData = c("x", "y"))

scHOT_spatial <- scHOT_stripOutput(scHOT_spatial)

scHOT documentation built on Nov. 8, 2020, 5:06 p.m.