get_read_str: Get read structure for particular scRNA-seq protocol
In scPipe: pipeline for single cell RNA-seq data analysis
Description
Usage
Arguments
Value
Examples
Description
The supported protocols are:
CelSeq
CelSeq2
DropSeq
10x (also called ChromiumV1)
If you know the structure of a specific protocol and would like it supported,
please leave a issue post at www.github.com/luyitian/scPipe.
Usage
1
get_read_str(protocol)
Arguments
protocol
name of the protocol
Value
list of UMI and Barcode locations for use in other scPipe functions
Examples
1
get_read_str("celseq")
scPipe documentation built on Nov. 8, 2020, 8:28 p.m.
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Description Usage Arguments Value Examples
Description
The supported protocols are:
CelSeq
CelSeq2
DropSeq
10x (also called ChromiumV1)
If you know the structure of a specific protocol and would like it supported, please leave a issue post at www.github.com/luyitian/scPipe.
Usage
1 | get_read_str(protocol)
|
Arguments
protocol |
name of the protocol |
Value
list of UMI and Barcode locations for use in other scPipe functions
Examples
1 | get_read_str("celseq")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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