|bsConversionPlot||Bisulfite conversion rate visualization|
|chromosomeCoverage||CpG covergae in each chromosome|
|coverage||Coverage for single cells|
|cpgDensity||Provides Coverage by the CpG density. CpG Density is defined...|
|cpgDiscretization||Discretize the CpG methylation values to align with single...|
|featureCoverage||Coverage based on the genomic feature|
|mbiasplot||Methylation bias plot|
|methylationDist||Provide graphics for methylation distribution|
|readmetrics||Provide graphics for read information|
|repMask||Provides Coverage metrics in the repeat masker region|
|report||Generates an inclusive report on methylation analysis|
|scmeth||scmeth: a package to conduct quality control analysis for...|
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