chromosomeCoverage: CpG covergae in each chromosome

Description Usage Arguments Value Examples

View source: R/chromosomeCoverage.R

Description

Provides Coverage metrics for each sample by the chromosome

Usage

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Arguments

bs

bsseq object

Value

matrix of chromsome covergae with column and rows indicating the samples and the chromosome respectively

Examples

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directory <- system.file("extdata/bismark_data",package='scmeth')
bs <- HDF5Array::loadHDF5SummarizedExperiment(directory)
chromosomeCoverage(bs)

scmeth documentation built on Nov. 8, 2020, 6:21 p.m.