Files in sojourner
Statistical analysis of single molecule trajectories
NEWS.md
README.md
sojourner documentation built on March 29, 2021, 6 p.m.
NAMESPACE
DESCRIPTION
R/plotTrackOverlay_Dcoef.R
R/combineTrackll.R
R/plotTrack.R
R/compareFolder.R
R/readDiaSessions.R
R/dwellTime.R
R/readParticleTracker.R
R/sojournerGUI.R
R/createTrackll.R
R/plotLocalizations_Density.R
R/Plotting.Helpers.R
R/readUtrack.R
R/Dcoef.Helpers.R
R/readDiatrack.R
R/plotIndividual_Tracks.R
R/helperFunctions.R
R/DisplacementCDF.R
R/mergeTracks.R
R/msd.R
R/maskTracks.R
R/sojourner.R
R/fitNormDistr.R
R/filterTrack.R
R/exportTrackll.R
R/linkSkippedFrames.R
R/squareDisp.R
R/tiff2pixmap.R
R/Dcoef.R
R/dispVariance.R
R/fitResidenceTime.R
R/readSlimFast.R
R/compare_RT_CDF.R
inst/doc/sojourner-vignette.html
inst/doc/sojourner-vignette.Rmd
inst/doc/sojourner-vignette.R
inst/extdata/PREF/profile.csv
inst/extdata/SWR1_2/SWR1_WT_140mW_image7_Nuclei.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image7.csv
inst/extdata/SWR1_2/SWR1_WT_140mW_image6.csv
inst/extdata/SWR1_2/SWR1_WT_140mW_image6_MASK.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image6_Nuclei.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image7_MASK.tif
inst/extdata/HSF/HSF-Halo_2.csv
inst/extdata/HSF/HSF-Halo_1_MASK.tif
inst/extdata/HSF/HSF-Halo_1.csv
inst/extdata/HSF/HSF-Halo_1_Nuclei.tif
inst/extdata/HSF/HSF-Halo_2_Nuclei.tif
inst/extdata/HSF/HSF-Halo_2_MASK.tif
inst/extdata/HSF_2/HSF-Halo_3.mat
inst/extdata/HSF_2/HSF-Halo_3_Nuclei.tif
inst/extdata/HSF_2/HSF-Halo_3_MASK.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_Nuclei.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_MASK.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2.tif.csv
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_MASK.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_Nuclei.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1.tif.csv
inst/extdata/SWR1/SWR1_WT_140mW_image6.csv
inst/extdata/SWR1/SWR1_WT_140mW_image6_MASK.tif
inst/extdata/SWR1/SWR1_WT_140mW_image6_Nuclei.tif
inst/extdata/HTZ1/HTZ1_140mW_WT.csv
inst/extdata/INDEX/indexFile2.csv
inst/extdata/INDEX/indexFile.csv
inst/extdata/INDEX/componentTrackID-SWR1.comp.1.csv
inst/extdata/INDEX/componentTrackID-SWR1.comp.2.csv
inst/unitTests/test_msd.R
inst/unitTests/test_trimTrack.R
inst/unitTests/test_filterTrack.R
inst/unitTests/test_createTrackll.R
inst/script/sojourner-Data_Documentation.Rmd
inst/myapp/ui.R
inst/myapp/server.R
inst/myapp/helpers.R
inst/myapp/www/ajax-loader-bar.gif
inst/myapp/rsconnect/shinyapps.io/sunjay-yoo/shiny-smt-040.dcf
build/vignette.rds
tests/runTests.R
vignettes/sojourner-vignette.Rmd
vignettes/sojourner_logo.png
man/exportTrackll-methods.Rd
man/msd-methods.Rd
man/combineTrackll-methods.Rd
man/displacementCDF-methods.Rd
man/squareDisp-methods.Rd
man/Dcoef-methods.Rd
man/createTrackll-methods.Rd
man/sojourner.Rd
man/dispVariance-methods.Rd
man/filterTrack-methods.Rd
man/plotTrack-methods.Rd
man/maskTracks-methods.Rd
man/plotIndividual_Tracks-methods.Rd
man/mergeTracks-methods.Rd
man/fitNormDistr-methods.Rd
man/fitRT-methods.Rd
man/linkSkippedFrames-methods.Rd
man/sojournerGUI-methods.Rd
man/compare_RT_CDF-methods.Rd
man/dwellTime-methods.Rd
man/compareFolder-methods.Rd
man/plotTrackOverlay_Dcoef-methods.Rd
man/plotLocalizations_Density-methods.Rd
