Files in sojourner

Statistical analysis of single molecule trajectories

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/plotTrackOverlay_Dcoef.R R/combineTrackll.R R/plotTrack.R R/compareFolder.R R/readDiaSessions.R R/dwellTime.R R/readParticleTracker.R R/sojournerGUI.R R/createTrackll.R R/plotLocalizations_Density.R R/Plotting.Helpers.R R/readUtrack.R R/Dcoef.Helpers.R R/readDiatrack.R R/plotIndividual_Tracks.R R/helperFunctions.R R/DisplacementCDF.R R/mergeTracks.R R/msd.R R/maskTracks.R R/sojourner.R R/fitNormDistr.R R/filterTrack.R R/exportTrackll.R R/linkSkippedFrames.R R/squareDisp.R R/tiff2pixmap.R R/Dcoef.R R/dispVariance.R R/fitResidenceTime.R R/readSlimFast.R R/compare_RT_CDF.R

inst/doc/sojourner-vignette.html

inst/doc/sojourner-vignette.Rmd inst/doc/sojourner-vignette.R

inst/extdata/PREF/profile.csv

inst/extdata/SWR1_2/SWR1_WT_140mW_image7_Nuclei.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image7.csv

inst/extdata/SWR1_2/SWR1_WT_140mW_image6.csv

inst/extdata/SWR1_2/SWR1_WT_140mW_image6_MASK.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image6_Nuclei.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image7_MASK.tif

inst/extdata/HSF/HSF-Halo_2.csv

inst/extdata/HSF/HSF-Halo_1_MASK.tif

inst/extdata/HSF/HSF-Halo_1.csv

inst/extdata/HSF/HSF-Halo_1_Nuclei.tif

inst/extdata/HSF/HSF-Halo_2_Nuclei.tif

inst/extdata/HSF/HSF-Halo_2_MASK.tif

inst/extdata/HSF_2/HSF-Halo_3.mat

inst/extdata/HSF_2/HSF-Halo_3_Nuclei.tif

inst/extdata/HSF_2/HSF-Halo_3_MASK.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_Nuclei.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_MASK.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2.tif.csv

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_MASK.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_Nuclei.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1.tif.csv

inst/extdata/SWR1/SWR1_WT_140mW_image6.csv

inst/extdata/SWR1/SWR1_WT_140mW_image6_MASK.tif

inst/extdata/SWR1/SWR1_WT_140mW_image6_Nuclei.tif

inst/extdata/HTZ1/HTZ1_140mW_WT.csv

inst/extdata/INDEX/indexFile2.csv

inst/extdata/INDEX/indexFile.csv

inst/extdata/INDEX/componentTrackID-SWR1.comp.1.csv

inst/extdata/INDEX/componentTrackID-SWR1.comp.2.csv

inst/unitTests/test_msd.R inst/unitTests/test_trimTrack.R inst/unitTests/test_filterTrack.R inst/unitTests/test_createTrackll.R inst/script/sojourner-Data_Documentation.Rmd inst/myapp/ui.R inst/myapp/server.R inst/myapp/helpers.R

inst/myapp/www/ajax-loader-bar.gif

inst/myapp/rsconnect/shinyapps.io/sunjay-yoo/shiny-smt-040.dcf

build/vignette.rds

tests/runTests.R vignettes/sojourner-vignette.Rmd

vignettes/sojourner_logo.png

man/exportTrackll-methods.Rd man/msd-methods.Rd man/combineTrackll-methods.Rd man/displacementCDF-methods.Rd man/squareDisp-methods.Rd man/Dcoef-methods.Rd man/createTrackll-methods.Rd man/sojourner.Rd man/dispVariance-methods.Rd man/filterTrack-methods.Rd man/plotTrack-methods.Rd man/maskTracks-methods.Rd man/plotIndividual_Tracks-methods.Rd man/mergeTracks-methods.Rd man/fitNormDistr-methods.Rd man/fitRT-methods.Rd man/linkSkippedFrames-methods.Rd man/sojournerGUI-methods.Rd man/compare_RT_CDF-methods.Rd man/dwellTime-methods.Rd man/compareFolder-methods.Rd man/plotTrackOverlay_Dcoef-methods.Rd man/plotLocalizations_Density-methods.Rd

sojourner documentation built on March 29, 2021, 6 p.m.