feature_boxplot: Feature boxplot

In structToolbox: Data processing & analysis tools for Metabolomics and other omics

Description

A boxplot to visualise the distribution of values within a feature.

Usage

feature_boxplot(
  label_outliers = TRUE,
  feature_to_plot,
  factor_name,
  show_counts = TRUE,
  ...
)

Arguments

label_outliers	(logical) Label outliers. Allowed values are limited to the following: "TRUE": The index for outlier samples is included on the plot. "FALSE": No labels are displayed. The default is TRUE.
feature_to_plot	(character, numeric, integer) The column name of the plotted feature.
factor_name	(character) The name of a sample-meta column to use.
show_counts	(logical) Show counts. Allowed values are limited to the following: "TRUE": The number of samples for each box is displayed. "FALSE": The number of samples for each box is not displayed. The default is TRUE.
...	Additional slots and values passed to struct_class.

Value

A feature_boxplot object.

Examples

D = MTBLS79_DatasetExperiment
C = feature_boxplot(factor_name='Species',feature_to_plot='Petal.Width')
chart_plot(C,D)

structToolbox documentation built on Nov. 8, 2020, 6:54 p.m.