timecourse: Statistical Analysis for Developmental Microarray Time Course Data
Version 1.48.0

Functions for data analysis and graphical displays for developmental microarray time course data.

Browse man pages Browse package API and functions Browse package files

AuthorYu Chuan Tai
Bioconductor views DifferentialExpression Microarray TimeCourse
Date of publicationNone
MaintainerYu Chuan Tai <yuchuan@stat.berkeley.edu>
LicenseLGPL
Version1.48.0
URL http://www.bioconductor.org
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("timecourse")

Man pages

abs2ratio: Convert log-values to log-ratios
fruitfly: Drosophila microarray time course data in Tomancak et al....
marrayTC-class: Microarray Time Course Object- class
matrix.cov: Covariance
mb.long: Multivariate Empirical Bayes Statistics for Longitudinal...
mb.MANOVA: Multivariate Empirical Bayes Analysis of Variance for...
ot.helmert: Helmert orthogonal transformation
plotProfile: Gene Temporal Profile Plot
univ.func: Univariate Data

Functions

First.lib Source code
LargeDataObject-class Man page
MArrayTC-class Man page
abs2ratio Man page Source code
fruitfly Man page
matrix.cov Man page Source code
mb.1D Man page Source code
mb.2D Man page Source code
mb.MANOVA Man page Source code
mb.long Man page Source code
mb.paired Man page Source code
ot.helmert Man page Source code
plotProfile Man page Source code
univ.func Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/abs2ratio.R
R/classes.R
R/matrix.cov.R
R/mb.1D.R
R/mb.2D.R
R/mb.MANOVA.R
R/mb.long.R
R/mb.paired.R
R/ot.helmert.R
R/plotProfile.R
R/univ.func.R
R/zzz.R
build
build/vignette.rds
data
data/fruitfly.RData
inst
inst/doc
inst/doc/timecourse.R
inst/doc/timecourse.Rnw
inst/doc/timecourse.pdf
man
man/abs2ratio.Rd
man/fruitfly.Rd
man/marrayTC-class.Rd
man/matrix.cov.Rd
man/mb.MANOVA.Rd
man/mb.long.Rd
man/ot.helmert.Rd
man/plotProfile.Rd
man/univ.func.Rd
vignettes
vignettes/timecourse.Rnw
vignettes/timecourse.bib
timecourse documentation built on May 20, 2017, 9:49 p.m.