dot-getChannelCentres: Find the centres of each of the wells in a given channel.

Description Usage Arguments Value Author(s)

Description

The plate should have been classified by k-means clustering.

Usage

1
.getChannelCentres(plate, cMethod, channel, minSeparation = 2000)

Arguments

plate

A ddpcrPlate object from which to extract the centres.

cMethod

The classification method to use (in the form of a character string).

channel

An integer 1 or 2 corresponding to the channel of interest.

minSeparation

The minimum distance required between two cluster centres in order for us to assume that k-means found two distinct clusters. Defaults to 2000.

Value

A list of data frames, where each data frame has information about the centres in the channel of interest.

Author(s)

Anthony Chiu, anthony.chiu@cruk.manchester.ac.uk


twoddpcr documentation built on Nov. 8, 2020, 5:49 p.m.