Description Usage Arguments Value
Parallel implementation of cross validation.
1 2 3 4 5 6 | CVP_ADMM(X = NULL, lam = 10^seq(-2, 2, 0.2), alpha = seq(0, 1, 0.2),
diagonal = FALSE, rho = 2, mu = 10, tau.inc = 2, tau.dec = 2,
crit = c("ADMM", "loglik"), tol.abs = 1e-04, tol.rel = 1e-04,
maxit = 1000, adjmaxit = NULL, K = 5, crit.cv = c("loglik",
"penloglik", "AIC", "BIC"), start = c("warm", "cold"), cores = 1,
trace = c("progress", "print", "none"))
|
X |
nxp data matrix. Each row corresponds to a single observation and each column contains n observations of a single feature/variable. |
lam |
positive tuning parameters for elastic net penalty. If a vector of parameters is provided, they should be in increasing order. Defaults to grid of values |
alpha |
elastic net mixing parameter contained in [0, 1]. |
diagonal |
option to penalize the diagonal elements of the estimated precision matrix (Ω). Defaults to |
rho |
initial step size for ADMM algorithm. |
mu |
factor for primal and residual norms in the ADMM algorithm. This will be used to adjust the step size |
tau.inc |
factor in which to increase step size |
tau.dec |
factor in which to decrease step size |
crit |
criterion for convergence ( |
tol.abs |
absolute convergence tolerance. Defaults to 1e-4. |
tol.rel |
relative convergence tolerance. Defaults to 1e-4. |
maxit |
maximum number of iterations. Defaults to 1e3. |
adjmaxit |
adjusted maximum number of iterations. During cross validation this option allows the user to adjust the maximum number of iterations after the first |
K |
specify the number of folds for cross validation. |
crit.cv |
cross validation criterion ( |
start |
specify |
cores |
option to run CV in parallel. Defaults to |
trace |
option to display progress of CV. Choose one of |
returns list of returns which includes:
lam |
optimal tuning parameter. |
alpha |
optimal tuning parameter. |
min.error |
minimum average cross validation error (cv.crit) for optimal parameters. |
avg.error |
average cross validation error (cv.crit) across all folds. |
cv.error |
cross validation errors (cv.crit). |
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