Man pages for ARTP
Gene and Pathway p-Values Computed using the Adaptive Rank Truncated Product
| ARTP | Gene and pathway p-values using the Adaptive Rank Truncated... |
| ARTP_pathway | Gene and pathway p-values using ARTP |
| gene.list | List to describe the gene-SNP file |
| gene_SNP_data | Gene-SNP data |
| geno_data | Sample genotype data |
| obs_pvalues | Observed p-values |
| perm_pvalues | Permutation p-values |
| pheno_data | Sample covariate and response data |
| pheno.list | List to describe the covariate and outcome data |
| plot_genes | Gene Plot |
| runPermutations | Calculate observed and permutation p-values for SNPs |
| single.marker.test | Single SNP test |
| snp.list | List to describe the genotype data |
