perm_pvalues: Permutation p-values
In ARTP: Gene and Pathway p-Values Computed using the Adaptive Rank Truncated Product
Description
Sample file of permutation p-values for the example in ARTP_pathway
Details
This is a comma delimited file with 101 rows with row 1 containing the SNP ids, and rows 2-101
containing the p-values. Each row represents one permutation.
Examples
1
2
3
4
# Read in and print the data
f <- system.file("sampleData", "perm_pvalues.txt", package="ARTP")
x <- scan(f, what="character", sep="\n")
substring(x[1:5], 1, 50)
ARTP documentation built on May 2, 2019, 6:51 a.m.
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Description
Sample file of permutation p-values for the example in ARTP_pathway
Details
This is a comma delimited file with 101 rows with row 1 containing the SNP ids, and rows 2-101 containing the p-values. Each row represents one permutation.
Examples
1 2 3 4 | # Read in and print the data
f <- system.file("sampleData", "perm_pvalues.txt", package="ARTP")
x <- scan(f, what="character", sep="\n")
substring(x[1:5], 1, 50)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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