HybridPop-class: Hybrid population

In AlphaSimR: Breeding Program Simulations

Hybrid population

Description

A lightweight version of Pop-class for hybrid lines. Memory is saved by not storing genotypic data.

Usage

## S4 method for signature 'HybridPop'
x[i]

## S4 method for signature 'HybridPop'
c(x, ...)

isHybridPop(x)

Arguments

x	a 'HybridPop'
i	index of individuals
...	additional 'HybridPop' objects

Methods (by generic)

• [: Extract HybridPop using index or id

• c(HybridPop): Combine multiple HybridPops

Functions

• isHybridPop(): Test if object is of a HybridPop class

Slots

nInd

number of individuals

id

an individual's identifier

mother

the identifier of the individual's mother

father

the identifier of the individual's father

nTraits

number of traits

gv

matrix of genetic values. When using GxE traits, gv reflects gv when p=0.5. Dimensions are nInd by nTraits.

pheno

matrix of phenotypic values. Dimensions are nInd by nTraits.

gxe

list containing GxE slopes for GxE traits

AlphaSimR documentation built on Nov. 2, 2023, 6:01 p.m.