editGenomeTopQtl | R Documentation |
Edits the top QTL (with the largest additive effect) to a homozygous state for the allele increasing. Only nonfixed QTL are edited The gv slot is recalculated to reflect the any changes due to editing, but other slots remain the same.
editGenomeTopQtl(pop, ind, nQtl, trait = 1, increase = TRUE, simParam = NULL)
pop |
an object of |
ind |
a vector of individuals to edit |
nQtl |
number of QTL to edit |
trait |
which trait effects should guide selection of the top QTL |
increase |
should the trait value be increased or decreased |
simParam |
an object of |
Returns an object of Pop-class
#Create founder haplotypes
founderPop = quickHaplo(nInd=2, nChr=1, segSites=10)
#Set simulation parameters
SP = SimParam$new(founderPop)
SP$addTraitA(10)
#Create population
pop = newPop(founderPop, simParam=SP)
#Change up to 10 loci for individual 1
pop2 = editGenomeTopQtl(pop, ind=1, nQtl=10, simParam=SP)
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