getSynthesisRatePosteriorVarianceForGene: getSynthesisRatePosteriorVarianceForGene

In AnaCoDa: Analysis of Codon Data under Stationarity using a Bayesian Framework

Description

Method of Parameter class (access via parameter$<function name>, where parameter is an object initialized by initializeParameterObject). Get synthesis rate variance for a gene

Arguments

samples	number of samples over which to calculate variance
geneIndex	corresponding index of gene in genome for which synthesis rate variance will be calculated. Should be a number between 1 and length(genome)
unbiased	Should calculate variance using unbiased (N-1) or biased (N) correction
log_scale	Calculate variance on log scale

Value

posterior mean synthesis rate for gene

AnaCoDa documentation built on Jan. 8, 2021, 2:37 a.m.