A | TF-gene regulation strength matrix |
alpha | Inverse-gamma distribution hyper-parameter alpha |
A_old | TF-gene regulation strength matrix sampled from the previous... |
A_sampling | Regulation Strength Sampling Function |
base_line | Gene baseline expression |
base_line_old | Gene baseline expression sampled from the previous round. |
baseline_sampling | Gene Baseline Expression Sampling Function |
beta | Inverse-gamma distribution hyper-parameter beta |
BICORN | BICORN Algorithm Function |
Binding_genes | Genes in the prior binding network |
Binding_matrix | Prior TF-gene binding network |
Binding_TFs | TFs in the prior binding network |
C | TF-gene binding network |
C_old | TF-gene binding network sampled from the previous round |
C_prior | Prior TF-gene binding network |
C_sampling_cluster | cis-Regulatory Module Sampling Function |
data_integration | Data Initialization for BICORN |
Exp_data | Gene expression data |
Exp_genes | Genes in the expression data |
sigma_A | Regulation strength variance |
sigma_baseline | Variance of baseline gene expression. |
sigma_noise | Variance of gene expression fitting residuals. |
sigmanoise_sampling | Fitting Residule Variance Sampling Function |
sigma_X | Transcription factor activity variance |
X | Transcription factr activity matrix |
X_old | Transcription factr activity matrix sampled from the previous... |
X_sampling | Transcription Factor Activity Sampling Function |
Y | Gene expression data used for module inference |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.