MacrocnemisRawSeqs: Sequences for the R.macrocnemis Brown Frog dataset

Description Usage Format References

Description

Rana macrocnemis (Amphibia, Ranidae) dataset, the Near Eastern brown frog, from a transition zone of landscapes in Georgia, Caucasus. Contains the mtDNA sequences (cytochrome b) of the Brown Frog dataset used in the BPEC examples. It is called using data(MacrocnemisRawSeqs).

Usage

1

Format

In total 40 mtDNA sequences of length 504 nucleotides each.

References

D. Tarkhnishvili, A. Hille and W. Böhme (2001) Humid forest refugia, speciation and secondary introgression between evolutionary lineages: differentiation in a Near Eastern brown frog, Rana macrocnemis. Biological Journal of the Linnean Society.

A. Hille, I. Manolopoulou and D. Tarkhnisvili (2015) Detecting landscape-dependent selection with Bayesian phylogeographic and ecological clustering: comparison of recombinant microsatellite and mtDNA haplotype data, (unpublished).


BPEC documentation built on Aug. 23, 2017, 1:02 a.m.