Files in BPEC
Bayesian Phylogeographic and Ecological Clustering

MD5
README.md
NAMESPACE
DESCRIPTION
build/vignette.rds
src/treelikelifunctions.c
src/matrices.c
src/bpecfunction.c
src/matrices.h
src/loopfunctions.h
src/randomnumbers.c
src/treelikelifunctions.h
src/hashingfunctions.c
src/loopfunctions.c
src/hashingfunctions.h
src/randomnumbers.h
src/registerDynamicSymbol.c
data/MacrocnemisCoordsLocsMini.RData
data/TransalpinaRawSeqs.RData
data/CladeBrownFrogsRawSeqs.RData
data/CladeBrownFrogsCoordsLocs.RData
data/MacrocnemisCoordsLocs.RData
data/MacrocnemisRawSeqs.RData
data/TransalpinaCoordsLocs.RData
R/bpec.treePlot.R R/bpec.load.R R/bpec.mcmc.R R/bpec.functions.R R/bpec.R R/bpec.covariatesPlot.R R/zzz.R R/bpec.phylo2GE.R R/bpec.contourPlot.R R/bpec.treeEdges.R vignettes/messy.pdf vignettes/ManolopoulouHilleEmersonBPEC_R4-012.pdf
vignettes/coordsLocsFile.txt
vignettes/ManolopoulouHilleEmersonBPEC_R4-001.jpg
vignettes/haplotypes.nex
vignettes/JSS2640.bib
vignettes/hproposal.jpg
vignettes/coalescentsubdivided.pdf
vignettes/BPEC.Rnw
vignettes/coalescent.pdf vignettes/haplotree.pdf
vignettes/bpecout.RData
vignettes/ancestrallocs.pdf
vignettes/Figures.key
vignettes/BPEC-012.pdf vignettes/ManolopoulouHilleEmersonBPEC_R4-014.pdf vignettes/haplotreesubdivided.pdf vignettes/BPEC-009.pdf man/bpec.treePlot.Rd man/MacrocnemisCoordsLocs.Rd man/output.mcmc.Rd man/MacrocnemisCoordsLocsMini.Rd man/bpec.mcmc.Rd man/bpec.Rd man/bpec.geoTree.Rd man/CladeBrownFrogsRawSeqs.Rd man/output.clust.Rd man/TransalpinaRawSeqs.Rd man/preproc.Rd man/input.Rd man/bpec.loadCoords.Rd man/output.tree.Rd man/bpec.contourPlot.Rd man/bpec.loadSeq.Rd man/TransalpinaCoordsLocs.Rd man/MacrocnemisRawSeqs.Rd man/CladeBrownFrogsCoordsLocs.Rd man/bpec.covariatesPlot.Rd
inst/coordsLocsFile.txt
inst/haplotypes.nex
inst/CITATION
inst/doc/BPEC.Rnw
inst/doc/BPEC.R inst/doc/BPEC.pdf
BPEC documentation built on March 2, 2020, 1:07 a.m.