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BacArena: Modeling Framework for Cellular Communities in their Environments
Can be used for simulation of organisms living in communities (Bauer and Zimmermann (2017) <doi:10.1371/journal.pcbi.1005544>). Each organism is represented individually and genome scale metabolic models determine the uptake and release of compounds. Biological processes such as movement, diffusion, chemotaxis and kinetics are available along with data analysis techniques.
Getting started
Browse package contents
Package details |
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| Author | Eugen Bauer [aut], Johannes Zimmermann [aut, cre] |
| Maintainer | Johannes Zimmermann <j.zimmermann@iem.uni-kiel.de> |
| License | GPL-3 | file LICENSE |
| Version | 1.8.2 |
| URL | https://BacArena.github.io/ |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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