BarcodingR
Species Identification using DNA Barcodes

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BarcodingR: Species Identification using DNA Barcodes
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Species Identification using DNA Barcodes

barcodes.evalBarcodes Evaluation
barcoding.gapBarcoding Gap Calculation
barcoding.spe.identifySpecies Identification using Protein-coding Barcodes
barcoding.spe.identify2Species Identification Based on Fuzzy-set Method and kmer
bbsikBp Barcoding Species Identify using Kmer
char2NumVectorCharacter to Integer Vector
compare2delimitationsComparision between two Delimitations
consensus.identifyConsensus Identification
digitize.DNADigitize DNAbin
DNAbin2kmerFreqMatrixCalculation of Kmer Frequency Matrix from DNAbin for Both...
FMFFuzzy Membership Function Value
FMFtheta12Calculate Intraspecific and Interspecific Variation
NAMESExtracts Lables of Samples
optimize.kmerOptimize kmer Length
pineMothCOIpine Moth COI
pineMothITS1pine Moth ITS1
pineMothITS2pine Moth ITS2
sample.refSample Random Datasets from References (DNAbin)
save.idsSave Identifications
summarize.refSummarize Reference Data
TDR2TDR2 Species Membership Value
TibetanMothTibetan Moth
BarcodingR documentation built on April 14, 2020, 6:04 p.m.

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