save.ids: Save Identifications

In BarcodingR: Species Identification using DNA Barcodes

Description

Output identified results to an outfile in temporty directory (found by tempdir() function).

Usage

save.ids(outfile = "identified.txt", ids)

Arguments

outfile	character string to indicate outfile name.
ids	object of class "BarcodingR", which contains identified taxon information.

Value

no value returned,but an output file.

Author(s)

Ai-bing ZHANG, PhD. CNU, Beijing, CHINA.

References

zhangab2008(at)mail.cnu.edu.cn

See Also

barcoding.spe.identify()

Examples

data(TibetanMoth) 
ref<-as.DNAbin(as.character(TibetanMoth[1:50,]))
que<-as.DNAbin(as.character(TibetanMoth[50:60,]))
bsi<-barcoding.spe.identify(ref, que, method = "fuzzyId")
bsi
save.ids(outfile="identified.txt",bsi)

BarcodingR documentation built on April 14, 2020, 6:04 p.m.