BayesTools
Tools for Bayesian Analyses

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435
Source code
41
Man pages
57
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BayesTools: Tools for Bayesian Analyses
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API

API for BayesTools
Tools for Bayesian Analyses

Global functions
.JAGS_add_priors.fun Source code
.JAGS_bridgesampling_posterior_info Source code
.JAGS_bridgesampling_posterior_info.PP Source code
.JAGS_bridgesampling_posterior_info.factor Source code
.JAGS_bridgesampling_posterior_info.simple Source code
.JAGS_bridgesampling_posterior_info.spike_and_slab Source code
.JAGS_bridgesampling_posterior_info.vector Source code
.JAGS_bridgesampling_posterior_info.weightfunction Source code
.JAGS_get_inits.fun Source code
.JAGS_init.PP Source code
.JAGS_init.factor Source code
.JAGS_init.simple Source code
.JAGS_init.spike_and_slab Source code
.JAGS_init.vector Source code
.JAGS_init.weightfunction Source code
.JAGS_marglik_parameters.PP Source code
.JAGS_marglik_parameters.factor Source code
.JAGS_marglik_parameters.simple Source code
.JAGS_marglik_parameters.spike_and_slab Source code
.JAGS_marglik_parameters.vector Source code
.JAGS_marglik_parameters.weightfunction Source code
.JAGS_marglik_parameters_formula_get Source code
.JAGS_marglik_priors.PP Source code
.JAGS_marglik_priors.factor Source code
.JAGS_marglik_priors.simple Source code
.JAGS_marglik_priors.spike_and_slab Source code
.JAGS_marglik_priors.vector Source code
.JAGS_marglik_priors.weightfunction Source code
.JAGS_monitor.PP Source code
.JAGS_monitor.factor Source code
.JAGS_monitor.simple Source code
.JAGS_monitor.spike_and_slab Source code
.JAGS_monitor.vector Source code
.JAGS_monitor.weightfunction Source code
.JAGS_prior.PP Source code
.JAGS_prior.factor Source code
.JAGS_prior.simple Source code
.JAGS_prior.spike_and_slab Source code
.JAGS_prior.vector Source code
.JAGS_prior.weightfunction Source code
.JAGS_prior_factor_names Source code
.center_priors Source code
.check_JAGS_syntax Source code
.check_and_name_parameters Source code
.check_and_set_truncation Source code
.check_log Source code
.check_log.p Source code
.check_lower.tail Source code
.check_n Source code
.check_p Source code
.check_parameter Source code
.check_parameter_dimensions Source code
.check_parameter_negative Source code
.check_parameter_positive Source code
.check_parameter_range Source code
.check_parameter_weigthfunction Source code
.check_prior Source code
.check_q Source code
.check_rstan Source code
.check_runjags Source code
.check_table_types Source code
.check_x Source code
.density.prior.PETPEESE Source code
.density.prior.orthonormal Source code
.density.prior.point Source code
.density.prior.simple Source code
.density.prior.spike_and_slab Source code
.density.prior.weightfunction Source code
.density.prior_need_samples Source code
.density.prior_transformation_functions Source code
.density.prior_transformation_inv_x Source code
.density.prior_transformation_x Source code
.density.prior_transformation_y Source code
.density.prior_type Source code
.diagnostics_plot_data Source code
.diagnostics_plot_data_autocorrelation Source code
.diagnostics_plot_data_density Source code
.diagnostics_plot_data_trace Source code
.ensemble_table_foundation Source code
.extract_stan Source code
.fit_to_posterior Source code
.format_column Source code
.format_column_names Source code
.geom_diagnostics.autocorrelation Source code
.geom_diagnostics.density Source code
.geom_diagnostics.trace Source code
.inclusion_BF.margliks Source code
.inclusion_BF.probs Source code
.interpret.BF Source code
.interpret.par Source code
.interpret.specification Source code
.is.wholenumber Source code
.is_prior_default_range Source code
.lines_diagnostics.autocorrelation Source code
.lines_diagnostics.density Source code
.lines_diagnostics.trace Source code
.mdone.sided_fixed Source code
.mdone.sided_general Source code
.mdone.sided_monotonic Source code
.mean.weightfunction Source code
.mix_posteriors.factor Source code
.mix_posteriors.simple Source code
.mix_posteriors.vector Source code
.mix_posteriors.weightfunction Source code
.mpone.sided_fixed Source code
.mpone.sided_general Source code
.mpone.sided_monotonic Source code
.mqone.sided_fixed Source code
.mqone.sided_general Source code
.mqone.sided_monotonic Source code
.onLoad Source code
.plot.prior.point Source code
.plot_data_prior_list.PETPEESE Source code
.plot_data_prior_list.simple Source code
.plot_data_prior_list.weightfunction Source code
.plot_data_samples.PETPEESE Source code
.plot_data_samples.factor Source code
.plot_data_samples.simple Source code
.plot_data_samples.weightfunction Source code
.plot_models.simple Source code
.plot_models_data_posterior Source code
.plot_models_data_prior Source code
.plot_prior_list.both Source code
.plot_prior_list.factor Source code
.print.prior.simple Source code
.prior_C Source code
.prior_C1 Source code
.prior_C2 Source code
.prior_bernoulli Source code
.prior_beta Source code
.prior_cauchy Source code
.prior_clean_input_name Source code
.prior_exp Source code
.prior_gamma Source code
.prior_informed.medicine_effect Source code
.prior_informed.medicine_heterogeneity Source code
.prior_informed.psychology Source code
.prior_invgamma Source code
.prior_lognormal Source code
.prior_mcauchy Source code
.prior_mnormal Source code
.prior_mt Source code
.prior_normal Source code
.prior_normal.orthonormal Source code
.prior_point Source code
.prior_t Source code
.prior_uniform Source code
.prior_weightfunction_one.sided Source code
.prior_weightfunction_one.sided.fixed Source code
.prior_weightfunction_two.sided Source code
.prior_weightfunction_two.sided.fixed Source code
.range.prior_quantile_default Source code
.remove_response Source code
.rone.sided_fixed Source code
.rone.sided_general Source code
.rone.sided_monotonic Source code
.simplify_prior_list Source code
.string_center Source code
.string_left Source code
.var.weightfunction Source code
.weightfunctions_check_alpha Source code
.weightfunctions_check_omega Source code
BayesTools Man page
BayesTools-package Man page
BayesTools_ensemble_tables Man page
BayesTools_model_tables Man page
JAGS_add_priors Man page Source code
JAGS_bridgesampling Man page Source code
JAGS_bridgesampling_posterior Man page Source code
JAGS_check_and_list Man page
JAGS_check_and_list_autofit_settings Man page Source code
JAGS_check_and_list_fit_settings Man page Source code
JAGS_check_convergence Man page Source code
JAGS_diagnostics Man page Source code
JAGS_diagnostics_autocorrelation Man page Source code
JAGS_diagnostics_density Man page Source code
JAGS_diagnostics_trace Man page Source code
JAGS_estimates_table Man page
JAGS_evaluate_formula Man page Source code
JAGS_fit Man page Source code
JAGS_formula Man page Source code
JAGS_get_inits Man page Source code
JAGS_inference_table Man page
JAGS_marglik_parameters Man page Source code
JAGS_marglik_parameters_formula Man page Source code
JAGS_marglik_priors Man page Source code
JAGS_marglik_priors_formula Man page Source code
JAGS_parameter_names Man page Source code
JAGS_summary_table Man page
JAGS_to_monitor Man page Source code
_PACKAGE Man page
add_column Man page Source code
ccdf Man page Source code
ccdf.prior Man page Source code
cdf Man page Source code
cdf.prior Man page Source code
check_bool Man page Source code
check_char Man page Source code
check_input Man page
check_int Man page Source code
check_list Man page Source code
check_real Man page Source code
compute_inference Man page Source code
contr.orthonormal Man page Source code
density.prior Man page Source code
dpoint Man page Source code
ensemble_diagnostics_table Man page Source code
ensemble_estimates_table Man page Source code
ensemble_inference Man page Source code
ensemble_inference_table Man page Source code
ensemble_summary_table Man page Source code
format_BF Man page Source code
format_parameter_names Man page Source code
geom_prior Man page
geom_prior_list Man page Source code
inclusion_BF Man page Source code
interpret Man page Source code
is.prior Man page Source code
is.prior.PEESE Man page Source code
is.prior.PET Man page Source code
is.prior.discrete Man page Source code
is.prior.dummy Man page Source code
is.prior.factor Man page Source code
is.prior.none Man page Source code
is.prior.orthonormal Man page Source code
is.prior.point Man page Source code
is.prior.simple Man page Source code
is.prior.spike_and_slab Man page Source code
is.prior.vector Man page Source code
is.prior.weightfunction Man page Source code
kitchen_rolls Man page
lines.prior Man page
lines_prior_list Man page Source code
lpdf Man page Source code
lpdf.prior Man page Source code
mccdf Man page Source code
mccdf.prior Man page Source code
mcdf Man page Source code
mcdf.prior Man page Source code
mdone.sided Man page Source code
mdone.sided_fixed Man page Source code
mdtwo.sided Man page Source code
mdtwo.sided_fixed Man page Source code
mean.prior Man page Source code
mix_posteriors Man page Source code
mlpdf Man page Source code
mlpdf.prior Man page Source code
model_summary_table Man page Source code
models_inference Man page Source code
mpdf Man page Source code
mpdf.prior Man page Source code
mpone.sided Man page Source code
mpone.sided_fixed Man page Source code
mptwo.sided Man page Source code
mptwo.sided_fixed Man page Source code
mqone.sided Man page Source code
mqone.sided_fixed Man page Source code
mqtwo.sided Man page Source code
mqtwo.sided_fixed Man page Source code
mquant Man page Source code
mquant.prior Man page Source code
parameter_names Man page
pdf Man page Source code
pdf.default Source code
pdf.prior Man page Source code
plot.prior Man page Source code
plot_models Man page Source code
plot_posterior Man page Source code
plot_prior_list Man page Source code
point Man page
ppoint Man page Source code
print.BayesTools_table Man page Source code
print.prior Man page Source code
prior Man page Source code
prior_PEESE Man page Source code
prior_PET Man page Source code
prior_PP Man page
prior_factor Man page Source code
prior_functions Man page
prior_functions_methods Man page
prior_informed Man page Source code
prior_informed_medicine_names Man page
prior_none Man page Source code
prior_spike_and_slab Man page Source code
prior_weightfunction Man page Source code
qpoint Man page Source code
quant Man page Source code
quant.prior Man page Source code
range.prior Man page Source code
rng Man page Source code
rng.prior Man page Source code
rone.sided Man page Source code
rone.sided_fixed Man page Source code
rpoint Man page Source code
rtwo.sided Man page Source code
rtwo.sided_fixed Man page Source code
runjags_estimates_empty_table Man page Source code
runjags_estimates_table Man page Source code
runjags_inference_empty_table Man page Source code
runjags_inference_table Man page Source code
sd Man page Source code
sd.default Source code
sd.prior Man page Source code
stan_estimates_table Man page Source code
transform_orthonormal_samples Man page Source code
var Man page Source code
var.default Source code
var.prior Man page Source code
weightfunctions Man page
weightfunctions_mapping Man page Source code
BayesTools documentation built on Sept. 14, 2022, 5:06 p.m.

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