Man pages for BoSSA
A Bunch of Structure and Sequence Analysis
| BoSSA-package | A Bunch of Structure and Sequence Analysis |
| circular_tree | Plot an inside-out circular tree |
| plot.pplace | Plot a pplace or jplace object |
| pplace | A placement object as obtained with the read_sqlite function |
| pplace_to_matrix | Pplace to contingency matrix |
| pplace_to_table | Merge the multiclass and the placement table of pplace object |
| pplace_to_taxonomy | Convert a pplace object to a taxonomy table |
| print.pdb | Compact display of protdb object |
| print.pplace | Compact display of pplace and jplace objects |
| read_jplace | Read a jplace file |
| read_pdb | Read Protein Data Bank (PDB) file |
| read_sqlite | Read a pplacer/guppy sqlite file |
| refpkg | Summary data and plots for reference packages |
| sub_pplace | Subsets a pplace object |
| write_jplace | Write a jplace or pplace object to the disk |
