pplace_to_taxonomy: Convert a pplace object to a taxonomy table
In BoSSA: A Bunch of Structure and Sequence Analysis

Convert a pplace object to a taxonomy table

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pplace_to_taxonomy(pplace,taxonomy,
rank=c("phylum","class","order","family","genus","species"),
type="all",tax_name=TRUE,run_id=NULL)

`pplace`	A pplace object
`taxonomy`	The taxonomy table as obtained using the refseq fonction with type set to taxonomy
`rank`	The desired rank for the taxonomy table
`type`	Wether all the possible classification available in the multiclass table are outputed (type="all") or only the best (type="best")
`tax_name`	Wether to use taxonomy names (default) or tax_id number
`run_id`	A vector of run_id to subset