CALANGO: Comparative Analysis with Annotation-Based Genomic Components

A first-principle, phylogeny-aware comparative genomics tool for investigating associations between terms used to annotate genomic components (e.g., Pfam IDs, Gene Ontology terms,) with quantitative or rank variables such as number of cell types, genome size, or density of specific genomic elements. See the project website for more information, documentation and examples, and <doi:10.1016/j.patter.2023.100728> for the full paper.

Package details

AuthorFrancisco Lobo [aut], Felipe Campelo [aut, cre], Jorge Augusto Hongo [aut], Giovanni Marques de Castro [aut], Gabriel Almeida [sad, dnc]
MaintainerFelipe Campelo <fcampelo@gmail.com>
LicenseGPL-2
Version1.0.16
URL https://labpackages.github.io/CALANGO/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CALANGO")

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CALANGO documentation built on April 26, 2023, 5:13 p.m.