API for CALANGO
Comparative Analysis with Annotation-Based Genomic Components

Global functions
AddGenomeVectors Source code
AnnotateResults Source code
CreateDictionary Source code
FileAddition Source code
FindContrasts Source code
FindCorrelations Source code
GenerateGenomeVector Source code
GroupElementCount Source code
ListAncestors Source code
ListKOs Source code
ListObsoletes Source code
ListSynonyms Source code
ObtainGeneGOancestors Source code
RemoveObsoleteAndAlternative Source code
activate_CRAN_dependencies_from_Rmd_reports Source code
check_bioc_dependencies Source code
check_inputs_correlation Source code
check_inputs_significance Source code
clean_data Source code
clean_data_correlation Source code
clean_data_significance Source code
do_analysis Source code
do_analysis_correlation Source code
do_analysis_significance Source code
install_bioc_dependencies Man page Source code
load_data Source code
load_data_correlation Source code
load_data_significance Source code
make_correlation_report Source code
make_report Man page Source code
make_significance_report Source code
parse_GenomeMap Source code
print_results_correlations Source code
read_calango_file Source code
restore_relative_paths Source code
retrieve_calanguize_genomes Man page Source code
retrieve_data_files Man page Source code
run_CALANGO Man page Source code
save_tsv_files Source code
set_absolute_paths Source code
CALANGO documentation built on Sept. 11, 2024, 6:33 p.m.