API for CALANGO
Comparative Analysis with Annotation-Based Genomic Components
| Global functions | |
|---|---|
| AddGenomeVectors | Source code |
| AnnotateResults | Source code |
| CreateDictionary | Source code |
| FileAddition | Source code |
| FindContrasts | Source code |
| FindCorrelations | Source code |
| GenerateGenomeVector | Source code |
| GroupElementCount | Source code |
| ListAncestors | Source code |
| ListKOs | Source code |
| ListObsoletes | Source code |
| ListSynonyms | Source code |
| ObtainGeneGOancestors | Source code |
| RemoveObsoleteAndAlternative | Source code |
| activate_CRAN_dependencies_from_Rmd_reports | Source code |
| check_bioc_dependencies | Source code |
| check_inputs_correlation | Source code |
| check_inputs_significance | Source code |
| clean_data | Source code |
| clean_data_correlation | Source code |
| clean_data_significance | Source code |
| do_analysis | Source code |
| do_analysis_correlation | Source code |
| do_analysis_significance | Source code |
| install_bioc_dependencies | Man page Source code |
| load_data | Source code |
| load_data_correlation | Source code |
| load_data_significance | Source code |
| make_correlation_report | Source code |
| make_report | Man page Source code |
| make_significance_report | Source code |
| parse_GenomeMap | Source code |
| print_results_correlations | Source code |
| read_calango_file | Source code |
| restore_relative_paths | Source code |
| retrieve_calanguize_genomes | Man page Source code |
| retrieve_data_files | Man page Source code |
| run_CALANGO | Man page Source code |
| save_tsv_files | Source code |
| set_absolute_paths | Source code |
