plotDistMat: Plot Similarity Matrix with pheatmap

In CIDER: Meta-Clustering for scRNA-Seq Integration and Evaluation

Plot Similarity Matrix with pheatmap

Description

This function creates a heatmap of the similarity matrix computed by getDistMat().

Usage

plotDistMat(dist.list, use = "coef")

Arguments

dist.list	A list representing the similarity matrix output by getDistMat(). Required.
use	Character string specifying the similarity measure to use. Default is "coef". No other option is currently available.

Value

A pheatmap object displaying the similarity matrix.

See Also

getDistMat

CIDER documentation built on April 4, 2025, 2:28 a.m.