addPlotStats: Add statistics to plot

In CRMetrics: Cell Ranger Output Filtering and Metrics Visualization

Add statistics to plot

Description

Use ggpubr to add statistics to plots.

Usage

addPlotStats(
  p,
  comp.group,
  metadata,
  h.adj = 0.05,
  primary.test,
  secondary.test,
  exact = FALSE
)

Arguments

p	Plot to add statistics to.
comp.group	Comparison metric.
metadata	Metadata for samples.
h.adj	Position of statistics test p value as % of max(y) (default = 0.05).
primary.test	Primary statistical test, e.g. "anova", "kruskal.test".
secondary.test	Secondary statistical test, e.g. "t-test", "wilcox.test"
exact	Whether to calculate exact p values (default = FALSE).

Value

ggplot2 object

CRMetrics documentation built on April 12, 2025, 2:26 a.m.