View source: R/inner_functions.R
read10x | R Documentation |
Load gene expression count data
read10x(
data.path,
samples = NULL,
raw = FALSE,
symbol = TRUE,
sep = "!!",
unique.names = TRUE,
n.cores = 1,
verbose = TRUE
)
data.path |
Path to cellranger count data. |
samples |
Vector of sample names (default = NULL) |
raw |
logical Add raw count matrices (default = FALSE) |
symbol |
The type of gene IDs to use, SYMBOL (TRUE) or ENSEMBLE (default = TRUE). |
sep |
Separator for cell names (default = "!!"). |
n.cores |
Number of cores for the calculations (default = 1). |
verbose |
Print messages (default = TRUE). |
data frame
## Not run:
cms <- read10x(data.path = "/path/to/count/data",
samples = crm$metadata$samples,
raw = FALSE,
symbol = TRUE,
n.cores = crm$n.cores)
## End(Not run)
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