getH5Paths: Get H5 file paths
In CRMetrics: Cell Ranger Output Filtering and Metrics Visualization
getH5Paths R Documentation
Get H5 file paths
Description
Get file paths for H5 files
Usage
getH5Paths(data.path, samples = NULL, type = NULL)
Arguments
data.path
character Path for directory containing sample-wise directories with Cell Ranger count outputs
samples
character Sample names to include (default = NULL)
type
character Type of H5 files to get paths for, one of "raw", "filtered" (Cell Ranger count outputs), "cellbender" (raw CellBender outputs), "cellbender_filtered" (CellBender filtered outputs) (default = "type")
CRMetrics documentation built on April 12, 2025, 2:26 a.m.
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| getH5Paths | R Documentation |
Get H5 file paths
Description
Get file paths for H5 files
Usage
getH5Paths(data.path, samples = NULL, type = NULL)
Arguments
data.path |
character Path for directory containing sample-wise directories with Cell Ranger count outputs |
samples |
character Sample names to include (default = NULL) |
type |
character Type of H5 files to get paths for, one of "raw", "filtered" (Cell Ranger count outputs), "cellbender" (raw CellBender outputs), "cellbender_filtered" (CellBender filtered outputs) (default = "type") |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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