API for Canopy
Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
| Global functions | |
|---|---|
| AML43 | Man page |
| MDA231 | Man page |
| MDA231_sampchain | Man page |
| MDA231_tree | Man page |
| addsamptree | Man page |
| canopy.BIC | Man page |
| canopy.cluster | Man page |
| canopy.cluster.Estep | Man page |
| canopy.cluster.Mstep | Man page |
| canopy.output | Man page |
| canopy.plottree | Man page |
| canopy.post | Man page |
| canopy.sample | Man page |
| canopy.sample.cluster | Man page |
| canopy.sample.cluster.nocna | Man page |
| canopy.sample.nocna | Man page |
| getCMCm | Man page |
| getCZ | Man page |
| getQ | Man page |
| getVAF | Man page |
| getZ | Man page |
| getclonalcomposition | Man page |
| getlikelihood | Man page |
| getlikelihood.sna | Man page |
| initialP | Man page |
| initialcna | Man page |
| initialcnacopy | Man page |
| initialsna | Man page |
| sampP | Man page |
| sampcna | Man page |
| sampcnacopy | Man page |
| sampsna | Man page |
| sampsna.cluster | Man page |
| sortcna | Man page |
| toy | Man page |
| toy2 | Man page |
| toy3 | Man page |
