getVAF: To get variant allele frequency (VAF)

Description Usage Arguments Value Author(s) Examples

View source: R/getVAF.R

Description

To get variant allele frequency (VAF) matrix, which contains percentage of mutant SNA alleles across samples. Used in canopy.sample.

Usage

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getVAF(tree,Y)

Arguments

tree

input tree

Y

SNA CNA overlapping matrix

Value

Variant allele frequency matrix VAF.

Author(s)

Yuchao Jiang [email protected]

Examples

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Canopy documentation built on Dec. 23, 2017, 5:09 p.m.