Man pages for CoreGx
Classes and Functions to Serve as the Basis for Other 'Gx' Packages
| amcc | Calculate an Adaptive Matthews Correlation Coefficient |
| cellInfo | cellInfo Generic |
| cellInfo-set | cellInfo<- Generic |
| cellNames | cellNames Generic |
| cellNames-set | cellNames<- Generic |
| checkCSetStructure | A function to verify the structure of a CoreSet |
| Cleveland_small | Cleaveland_mut RadioSet subsetted and cast as CoreSet |
| connectivityScore | Function computing connectivity scores between two signatures |
| CoreSet | CoreSet constructor |
| CoreSet-class | A Superclass to Contain Data for Genetic Profiling and... |
| cosinePerm | Computes the cosine similarity and significance using... |
| cSetName | cSetName Generic |
| dateCreated | dateCreated Generic |
| distancePointLine | Calculate shortest distance between point and line |
| distancePointSegment | Calculate shortest distance between point and line segment |
| dot-GetSupportVec | .GetSupportVec |
| examineGOF | Getter for attributes of an object |
| featureInfo | featureInfo Generic |
| featureInfo-set | featureInfo<- Generic |
| fNames | fNames Generic |
| gwc | Calculate the gwc score between two vectors, using either a... |
| intersectList | Utility to find the intersection between a list of more than... |
| mcc | Compute a Mathews Correlation Coefficient |
| mDataNames | mDataNames Generic |
| mDataNames-CoreSet-method | mDataNames |
| molecularProfiles | molecularProfiles Generic |
| molecularProfiles-set | molecularProfiles<- Generic |
| pertNumber | pertNumber Generic |
| pertNumber-set | pertNumber<- Generic |
| phenoInfo | phenoInfo Generic |
| phenoInfo-set | phenoInfo<- Generic |
| sensitivityInfo | sensitivityInfo Generic |
| sensitivityInfo-set | sensitivityInfo<- Generic |
| sensitivityMeasures | sensitivityMeasures Generic |
| sensitivityProfiles | sensitivityProfiles Generic |
| sensitivityProfiles-set | sensitivityProfiles<- Generic |
| sensNumber | sensNumber Generic |
| sensNumber-set | sensNumber<- Generic |
| show-CoreSet-method | Show a CoreSet |
| symSetDiffList | Utility to find the symmetric set difference of a list of two... |
| unionList | Utility to find the union between a list of more than two... |
