API for Cyclops
Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
| Global functions | |
|---|---|
| .appendSqlCyclopsData | Source code |
| .checkCovariates | Source code |
| .checkData | Source code |
| .checkFloatingPoint | Source code |
| .checkInterface | Source code |
| .createManualAndVignettes | Source code |
| .cyclopsFinalizeData | Source code |
| .cyclopsFitModel | Source code |
| .cyclopsGetBeta | Source code |
| .cyclopsGetComputeDevice | Source code |
| .cyclopsGetConvergenceType | Source code |
| .cyclopsGetFisherInformation | Source code |
| .cyclopsGetFixedBeta | Source code |
| .cyclopsGetHasIntercept | Source code |
| .cyclopsGetHasOffset | Source code |
| .cyclopsGetInterceptLabel | Source code |
| .cyclopsGetIsRegularized | Source code |
| .cyclopsGetIsSurvivalNames | Source code |
| .cyclopsGetLogLikelihood | Source code |
| .cyclopsGetLogLikelihoodHessianDiagonal | Source code |
| .cyclopsGetMeanOffset | Source code |
| .cyclopsGetModelTypeNames | Source code |
| .cyclopsGetNewPredictiveLogLikelihood | Source code |
| .cyclopsGetProfileLikelihood | Source code |
| .cyclopsGetRemoveInterceptNames | Source code |
| .cyclopsGetSchoenfeldResiduals | Source code |
| .cyclopsGetUseOffsetNames | Source code |
| .cyclopsInitializeModel | Source code |
| .cyclopsLogModel | Source code |
| .cyclopsLogResults | Source code |
| .cyclopsMakeDirty | Source code |
| .cyclopsMedian | Source code |
| .cyclopsModelData | Source code |
| .cyclopsNewSqlData | Source code |
| .cyclopsNormalizeCovariates | Source code |
| .cyclopsPredictModel | Source code |
| .cyclopsProfileModel | Source code |
| .cyclopsQuantile | Source code |
| .cyclopsReadData | Source code |
| .cyclopsRunBootstrap | Source code |
| .cyclopsRunCrossValidation | Source code |
| .cyclopsSetBeta | Source code |
| .cyclopsSetCensorWeights | Source code |
| .cyclopsSetControl | Source code |
| .cyclopsSetConvergenceType | Source code |
| .cyclopsSetFixedBeta | Source code |
| .cyclopsSetHasIntercept | Source code |
| .cyclopsSetParameterizedPrior | Source code |
| .cyclopsSetPrior | Source code |
| .cyclopsSetStartingBeta | Source code |
| .cyclopsSetWeights | Source code |
| .cyclopsSum | Source code |
| .cyclopsSumByGroup | Source code |
| .cyclopsSumByStratum | Source code |
| .cyclopsTestParameterizedPrior | Source code |
| .cyclopsTestProportionality | Source code |
| .cyclopsUnivariableCorrelation | Source code |
| .cyclopsUnivariableSeparability | Source code |
| .fitCyclopsSimulationUsingCyclops | Source code |
| .fitCyclopsSimulationUsingOtherThanCyclops | Source code |
| .fitUsingClogit | Source code |
| .fitUsingCoxph | Source code |
| .getCovariateTypes | Source code |
| .getDefaultGPUDevice | Source code |
| .getNumberOfRepetitions | Source code |
| .initAdaptiveProfile | Source code |
| .isRcppPtrNull | Source code |
| .isSorted | Source code |
| .isSortedVectorList | Source code |
| .isSurvivalModelType | Source code |
| .isValidModelType | Source code |
| .loadCyclopsDataMultipleX | Source code |
| .loadCyclopsDataStratTimeEffects | Source code |
| .loadCyclopsDataX | Source code |
| .loadCyclopsDataY | Source code |
| .makeHierarchyGraph | Source code |
| .normalizeCovariates | Source code |
| .removeIntercept | Source code |
| .setControl | Source code |
| .useOffsetModelType | Source code |
| Cyclops | Man page |
| Cyclops-package | Man page |
| Multitype | Man page Source code |
| aconfint | Man page Source code |
| appendSqlCyclopsData | Man page Source code |
| coef.cyclopsFit | Man page Source code |
| confint.cyclopsFit | Man page Source code |
| convertToCyclopsData | Man page Source code |
| convertToCyclopsData.data.frame | Man page Source code |
| convertToCyclopsData.tbl_dbi | Man page Source code |
| convertToCyclopsVariance | Man page Source code |
| convertToGlmnetLambda | Man page Source code |
| convertToTimeVaryingCoef | Man page Source code |
| coverage | Man page Source code |
| createAutoGridCrossValidationControl | Man page Source code |
| createControl | Man page Source code |
| createCyclopsData | Man page Source code |
| createNonSeparablePrior | Man page Source code |
| createParameterizedPrior | Man page Source code |
| createPrior | Man page Source code |
| createSqlCyclopsData | Source code |
| createWeightBasedSearchControl | Man page Source code |
| cyclops | Man page |
| finalizeSqlCyclopsData | Man page Source code |
| fitCyclopsModel | Man page Source code |
| fitCyclopsSimulation | Man page Source code |
| fixedGridProfileLogLikelihood | Source code |
| getCovariateIds | Man page Source code |
| getCovariateTypes | Man page Source code |
| getCrossValidationInfo | Man page Source code |
| getCyclopsPredictiveLogLikelihood | Man page Source code |
| getCyclopsProfileLogLikelihood | Man page Source code |
| getFineGrayWeights | Man page Source code |
| getFloatingPointSize | Man page Source code |
| getHyperParameter | Man page Source code |
| getNumberOfCovariates | Man page Source code |
| getNumberOfRows | Man page Source code |
| getNumberOfStrata | Man page Source code |
| getNumberOfTypes | Man page Source code |
| getSEs | Man page Source code |
| getTimeVector | Source code |
| getUnivariableCorrelation | Man page Source code |
| getUnivariableSeparability | Man page Source code |
| getYVector | Source code |
| isInitialized | Man page Source code |
| isSorted | Source code |
| listGPUDevices | Man page Source code |
| loadNewSqlCyclopsDataMultipleX | Source code |
| loadNewSqlCyclopsDataStratTimeEffects | Source code |
| loadNewSqlCyclopsDataX | Source code |
| loadNewSqlCyclopsDataY | Source code |
| logLik.cyclopsFit | Man page Source code |
| meanLinearPredictor | Man page Source code |
| mse | Man page Source code |
| nonSeparableHook | Source code |
| oxford | Man page |
| plotCyclopsSimulationFit | Man page Source code |
| predict.cyclopsFit | Man page Source code |
| print.cyclopsData | Man page Source code |
| print.cyclopsFit | Man page Source code |
| print.cyclopsZph | Source code |
| printMatrixMarket | Man page Source code |
| readCyclopsData | Man page Source code |
| reduce | Man page Source code |
| residuals.cyclopsFit | Man page Source code |
| runBootstrap | Man page Source code |
| setOpenCLDevice | Man page Source code |
| simulateCyclopsData | Man page Source code |
| splitTime | Man page Source code |
| summary.cyclopsData | Man page Source code |
| survfit.cyclopsFit | Man page Source code |
| testProportionality | Man page Source code |
| vcov.cyclopsFit | Man page Source code |
