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Generates DNA sequences based on Markov model techniques for matched sequences. This can be generalized to several sequences. The sequences (taxa) are then arranged in an evolutionary tree (phylogenetic tree) depicting how taxa diverge from their common ancestors. This gives the tests and estimation methods for the parameters of different models. Standard phylogenetic methods assume stationarity, homogeneity and reversibility for the Markov processes, and often impose further restrictions on the parameters.
Package details 


Author  Faisal Ababneh, John Robinson, Lars S Jermiin and Hasinur Rahaman Khan 
Maintainer  Hasinur Rahaman Khan <[email protected]> 
License  GPL2 
Version  1.0 
Package repository  View on CRAN 
Installation 
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