This function calculates the paralinear distance between K matched DNA sequences.
a 4^K array containing the joint distribution array F(t) or the observed array N
This function calculates the paralinear distances between K matched DNA sequences, depending on the joint distribution array for these K sequences or on the observed divergence array N.
A K x K symmetric matrix distances between the K sequences
Faisal Ababneh, Lars S Jermiin, Chunsheng Ma, John Robinson (2006). Matched-pairs tests of homogeneity with applications to homologous nucleotide sequences. Bioinformatics, 22(10), 1225-1231.
gn2, gn, Fmatrix, Ntml
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