Generating and Testing DNA Sequences

artomat | Transforming 4^K Array to m \times K Matrix |

Distance | Paralinear Distances |

DNAseqtest-package | Generating and Testing DNA Sequences |

Fmatrix | Joint Distribution for Two Matched Sequences |

gn | Joint Distribution for K Matched Sequences |

gn2 | Joint Distribution for K Matched Sequences (2) |

gn3sim | Generating Random DNA Samples Using the Rambaut and Grassly... |

likelihood | Negative Log Likelihood Ratio |

Ntml | Generating Samples from a Multinomial Distribution |

Pt | Transition Probability Function |

simapp | Generating Random DNA Samples Using Approximation Method |

simemb | Generating Random DNA Samples Using Embedded Markov Chain |

Smatrix | Symmetric Matrix S |

TEST2 | Test for Symmetry of Matched DNA Sequences |

TEST3 | Overall Test for Marginal Symmetry |

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