agconst: Test null hypothesis of constant regression function against...

In DoubleCone: Test Against Parametric Regression Function

Description

Given a response and 1-3 predictors, the function will test the null hypothesis that the response and predictors are not related (i.e., regression function is constant), against the alternative that the regression function is monotone in each of the predictors. For one predictor, the alternative set is a double cone; for two predictors the alternative set is a quadruple cone, and an octuple cone alternative is used when there are three predictors.

Usage

agconst(y, xmat, nsim = 1000)

Arguments

y	A numeric response vector, length n
xmat	an n by k design matrix, full column rank, where k=1,2, or 3.
nsim	The number of data sets simulated under the null hypothesis, to estimate the null distribution of the test statistic. The default is 1000, make this larger if a more precise p-value is desired.

Details

For one predictor, the set of non-decreasing regression functions can be described by an n-dimensional convex polyhedral cone, and the set of non-increasing regression functions is the "opposite" cone. The one-dimensional null space is the intersection of these cones. For two predictors, the alternative set consists of four cones, defined by combinations of increasing/decreasing assumptions, and for three predictors we have eight cones.

Value

pval	The p-value for the test: H0: constant regression function
p1 through p8	monotone fits – only p1 and p2 are returned for one predictor, etc.
thetahat	The least-squares alternative fit – i.e., the projection onto the multiple-cone alternative

Author(s)

Mary C Meyer and Bodhisattva Sen

References

TBA

See Also

doubconetest,partlintest

Examples

	n=100
	x1=runif(n);x2=runif(n);xmat=cbind(x1,x2)
	mu=1:n;for(i in 1:n){mu[i]=20*max(x1[i]-2/3,x2[i]-2/3,0)^2}
	x1g=1:21/22;x2g=x1g
	par(mar=c(1,1,1,1))
	y=mu+rnorm(n)
	ans=agconst(y,xmat,nsim=0)
	grfit=matrix(nrow=21,ncol=21)
	for(i in 1:21){for(j in 1:21){
			if(sum(x1>=x1g[i]&x2>=x2g[j])>0){
				if(sum(x1<=x1g[i]&x2<=x2g[j])>0){
					f1=min(ans$thetahat[x1>=x1g[i]&x2>=x2g[j]])
					f2=max(ans$thetahat[x1<=x1g[i]&x2<=x2g[j]])
					grfit[i,j]=(f1+f2)/2
				}else{
					grfit[i,j]=min(ans$thetahat)
				}
			}else{grfit[i,j]=max(ans$thetahat)}
	}}
	persp(x1g,x2g,grfit,th=-50,tick="detailed",xlab="x1",ylab="x2",zlab="mu")
##to get p-value for test against constant function:
#	ans=agconst(y,xmat,nsim=1000)
#	ans$pval

DoubleCone documentation built on May 2, 2019, 1:09 p.m.