coresidence: coresidence summary
In EloRating: Animal Dominance Hierarchies by Elo Rating

Description Usage Arguments Details Value See Also Examples

coresidence summary

1	coresidence(eloobject)

eloobject

result from elo.seq

This function provides a summary of the presence of individuals (and dyads) during the data sequence. This will be only informative if there was actually presence information supplied to elo.seq.

a list with three items:

$global (a numeric vector)

n_int: total number of interactions
n_dyads: total number of dyads
prop_nocores: proportion of dyads that were never co-resident
mean_cores_prop: mean proportion over individuals of proportions of all other IDs the focal was co-resident with at some point

$dyads (a data.frame)

id1, id2: the IDs
n_int: number of interactions for dyad
cores_dur: the duration of co-residence
none_dur: the duration for neither ID being present (both are absent)
one_dur: the duration of time when one ID was present but not the other

$individuals (a data.frame)

id: the ID
n_int: number of interactions
presdays: days of presence
cores_n_ind: co-resident with these individuals at some point
cores_prop: proportion of individuals with which ID was co-resident
stints: number of continuous bouts of presence

presence_summary

set.seed(123)
IA <- randomsequence(nID = 10, avgIA = 20, presence = c(0.7, 0.8))
SEQ <- elo.seq(winner = IA$seqdat$winner, loser = IA$seqdat$loser, Date = IA$seqdat$Date,
               presence = IA$pres, runcheck = FALSE, progressbar = FALSE)
coresidence(SEQ)