PlotGG: Wrap PlotData result in ggplot object.

In EmbedSOM: Fast Embedding Guided by Self-Organizing Map

Wrap PlotData result in ggplot object.

Description

This creates a ggplot2 object for plotting.

Usage

PlotGG(embed, ...)

Arguments

embed	Embedding data
...	Extra arguments passed to PlotData()

Examples

library(EmbedSOM)
library(ggplot2)

# simulate a simple dataset
e <- cbind(rnorm(10000),rnorm(10000))

PlotGG(e, data=data.frame(Expr=runif(10000))) +
  geom_point(aes_string(color="Expr"))

EmbedSOM documentation built on July 5, 2022, 5:14 p.m.