API for EpiModel
Mathematical Modeling of Infectious Disease Dynamics

Global functions
EpiModel Man page
EpiModel-package Man page
InitErgmTerm.absdiffby Man page Source code
InitErgmTerm.absdiffnodemix Man page Source code
[<-.networkLite Man page
absdiffby Man page
absdiffnodemix Man page
add.edges.networkLite Man page Source code
add_attr Man page Source code
add_control Man page Source code
add_epi Man page Source code
add_init Man page Source code
add_param Man page Source code
add_vertices Man page Source code
append_attr Man page Source code
append_core_attr Man page Source code
apportion_lr Man page Source code
arrivals.2g.net Man page Source code
arrivals.icm Man page Source code
arrivals.icm.bip Man page Source code
arrivals.net Man page Source code
as.data.frame.dcm Man page Source code
as.data.frame.icm Man page Source code
as.data.frame.netdx Man page Source code
as.data.frame.netsim Man page Source code
as.edgelist.networkLite Man page Source code
as.network.transmat Man page Source code
as.networkLite Man page Source code
as.networkLite.network Man page Source code
as.networkLite.networkLite Man page Source code
as.phylo.transmat Man page Source code
auto_update_attr Man page Source code
brewer_ramp Man page Source code
check_attr_lengths Man page Source code
check_degdist_bal Man page Source code
color_tea Man page Source code
common_updater Man page Source code
comp_plot Man page Source code
comp_plot.dcm Man page Source code
comp_plot.icm Man page Source code
comp_plot.netsim Man page Source code
control.dcm Man page Source code
control.icm Man page Source code
control.net Man page Source code
copy_datattr_to_nwattr Man page Source code
copy_nwattr_to_datattr Man page Source code
create_dat_object Man page Source code
crosscheck.dcm Man page Source code
crosscheck.icm Man page Source code
crosscheck.net Man page Source code
dcm Man page Source code
dcm.mods Man page
deleteAttr Man page Source code
delete_attr Man page Source code
delete_vertices Man page Source code
denom Source code
departures.2g.net Man page Source code
departures.icm Man page Source code
departures.icm.bip Man page Source code
departures.net Man page Source code
discord_edgelist Man page Source code
dissolution_coefs Man page Source code
draw_means Source code
draw_qnts Source code
edgelist_censor Man page Source code
edgelist_meanage Man page Source code
edges_correct Man page Source code
epiweb Man page Source code
format_param Man page Source code
generate_random_params Man page Source code
geom_bands Man page Source code
get.network.attribute.networkLite Man page Source code
get.vertex.attribute.networkLite Man page Source code
get_args Man page Source code
get_attr Man page Source code
get_attr_history Man page Source code
get_attr_list Man page Source code
get_attr_prop Man page Source code
get_control Man page Source code
get_control_list Man page Source code
get_cumulative_edgelist Man page Source code
get_cumulative_edgelists_df Man page Source code
get_current_timestep Man page Source code
get_degree Man page Source code
get_edgelist Man page Source code
get_epi Man page Source code
get_epi_list Man page Source code
get_formula_term_attr Man page Source code
get_init Man page Source code
get_init_list Man page Source code
get_network Man page Source code
get_network_term_attr Man page Source code
get_nwparam Man page Source code
get_nwstats Man page Source code
get_param Man page Source code
get_param_list Man page Source code
get_param_set Man page Source code
get_partners Man page Source code
get_posit_ids Man page Source code
get_sims Man page Source code
get_transmat Man page Source code
get_unique_ids Man page Source code
get_vertex_attribute Man page Source code
harrow Source code
icm Man page Source code
idgroup Man page Source code
increment_timestep Man page Source code
infection.2g.net Man page Source code
infection.icm Man page Source code
infection.icm.bip Man page Source code
infection.net Man page Source code
init.dcm Man page Source code
init.icm Man page Source code
init.net Man page Source code
init_status.icm Man page Source code
init_status.net Man page Source code
init_tergmLite Man page Source code
initialize.icm Man page Source code
initialize.net Man page Source code
is.transmat Man page Source code
is_active_posit_ids Man page Source code
is_active_unique_ids Man page Source code
list.network.attributes.networkLite Man page Source code
list.vertex.attributes.networkLite Man page Source code
make_dissolution_stats Man page Source code
make_formation_table Man page Source code
mbox Source code
mcat Man page Source code
merge.icm Man page Source code
merge.netsim Man page Source code
mixingmatrix.networkLite Man page Source code
mod_SIR_1g_cl Man page Source code
mod_SIR_1g_op Man page Source code
mod_SIR_2g_cl Man page Source code
mod_SIR_2g_op Man page Source code
mod_SIS_1g_cl Man page Source code
mod_SIS_1g_op Man page Source code
mod_SIS_2g_cl Man page Source code
mod_SIS_2g_op Man page Source code
mod_SI_1g_cl Man page Source code
mod_SI_1g_op Man page Source code
mod_SI_2g_cl Man page Source code
mod_SI_2g_op Man page Source code
modules.icm Man page
modules.net Man page
mutate_epi Man page Source code
net-accessor Man page
netdx Man page Source code
netest Man page Source code
netsim Man page Source code
netsim_cond_msg Man page Source code
netsim_loop Man page Source code
network.edgecount.networkLite Man page Source code
network.naedgecount.networkLite Man page Source code
networkLite Man page Source code
networkLite.edgelist Man page Source code
networkLite.matrix Man page
networkLite.numeric Man page Source code
networkLitemethods Man page
network_initialize Man page Source code
nwupdate.net Man page Source code
param.dcm Man page Source code
param.icm Man page Source code
param.net Man page Source code
param_random Man page Source code
plot.dcm Man page Source code
plot.icm Man page Source code
plot.netdx Man page Source code
plot.netsim Man page Source code
plot.transmat Man page Source code
prevalence.icm Man page Source code
prevalence.icm.bip Man page Source code
prevalence.net Man page Source code
print.control.dcm Source code
print.control.icm Source code
print.control.net Source code
print.dcm Source code
print.disscoef Source code
print.icm Source code
print.init.dcm Source code
print.init.icm Source code
print.init.net Source code
print.netdx Source code
print.netest Source code
print.netsim Source code
print.networkLite Man page Source code
print.param.dcm Source code
print.param.icm Source code
print.param.net Source code
print_nwstats_table Man page Source code
process_out.net Man page Source code
record_attr_history Man page Source code
record_raw_object Man page Source code
recovery.2g.net Man page Source code
recovery.icm Man page Source code
recovery.icm.bip Man page Source code
recovery.net Man page Source code
resim_nets Man page Source code
saveout.dcm Man page Source code
saveout.icm Man page Source code
saveout.net Man page Source code
set.network.attribute.networkLite Man page Source code
set.vertex.attribute.networkLite Man page Source code
set_attr Man page Source code
set_control Man page Source code
set_current_timestep Man page Source code
set_epi Man page Source code
set_init Man page Source code
set_param Man page Source code
set_transmat Man page Source code
set_vertex_attribute Man page Source code
shiftVec Source code
sim_nets_t1 Man page Source code
ssample Man page Source code
summary.dcm Man page Source code
summary.icm Man page Source code
summary.netest Man page Source code
summary.netsim Man page Source code
test_icm Man page Source code
test_net Man page Source code
trackers.net Man page Source code
transmat Man page
truncate_sim Man page Source code
unique_id-tools Man page
update_cumulative_edgelist Man page Source code
update_dissolution Man page
update_list Man page Source code
update_params Man page Source code
update_unique_ids Man page Source code
updater.net Man page Source code
varrow Source code
verbose.dcm Man page Source code
verbose.icm Man page Source code
verbose.net Man page Source code
EpiModel documentation built on Feb. 2, 2022, 9:06 a.m.