# plot.multiMCA: Plots Multiple Factor Analysis In GDAtools: A Toolbox for Geometric Data Analysis and More

 plot.multiMCA R Documentation

## Plots Multiple Factor Analysis

### Description

Plots Multiple Factor Analysis data, resulting from `multiMCA` function.

### Usage

```## S3 method for class 'multiMCA'
plot(x, type = "v", axes = c(1, 2), points = "all", threshold = 2.58,
groups = 1:x\$call\$ngroups, col = rainbow(x\$call\$ngroups), app = 0, ...)
```

### Arguments

 `x` object of class `'multiMCA'` `type` character string: 'v' to plot the categories (default), 'i' to plot individuals' points, 'inames' to plot individuals' names `axes` numeric vector of length 2, specifying the components (axes) to plot (c(1,2) is default) `points` character string. If 'all' all points are plotted (default); if 'besth' only those who are the most correlated to horizontal axis are plotted; if 'bestv' only those who are the most correlated to vertical axis are plotted; if 'best' only those who are the most coorelated to horizontal or vertical axis are plotted. `threshold` numeric value. V-test minimal value for the selection of plotted categories. `groups` numeric vector specifying the groups of categories to plot. By default, every groups of categories will be plotted `col` a color for the points of the individuals or a vector of colors for the labels of the groups of categories (by default, rainbow palette is used) `app` numerical value. If 0 (default), only the labels of the categories are plotted and their size is constant; if 1, only the labels are plotted and their size is proportional to the weights of the categories; if 2, points (triangles) and labels are plotted, and points size is proportional to the weight of the categories. `...` further arguments passed to or from other methods, such as cex, cex.main, ...

### Details

A category is considered to be one of the most correlated to a given axis if its test-value is higher then 2.58 (which corresponds to a 0.05 threshold).

Nicolas Robette

### References

Escofier, B. and Pages, J. (1994) "Multiple Factor Analysis (AFMULT package)". Computational Statistics and Data Analysis, 18, 121-140.

`multiMCA`, `textvarsup`, `speMCA`, `csMCA`, `MFA`

### Examples

```## Performs a specific MCA on music variables of 'Taste' example data set,
## another one on movie variables of 'Taste' example data set,
## and then a Multiple Factor Analysis and plots the results.
data(Taste)
mca1 <- speMCA(Taste[,1:5],excl=c(3,6,9,12,15))
mca2 <- speMCA(Taste[,6:11],excl=c(3,6,9,12,15,18))
mfa <- multiMCA(list(mca1,mca2))
plot.multiMCA(mfa,col=c('darkred','darkblue'))
plot.multiMCA(mfa,groups=2,app=1)
```

GDAtools documentation built on March 18, 2022, 5:13 p.m.