Description Usage Details References See Also Examples
Transcription Start Site Distributions (TSSDs) by CAGE tags.
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cage
is a list of 20 named TSSDs.
cagel
is a longer version of cage
, with 50 named TSSDs.
Zhao et al (2011), "Systematic Clustering of Transcription Start Site Landscapes", PLoS ONE 6(8): e23409.
http://dx.plos.org/10.1371/journal.pone.0023409
gmdp
and gmdm
, with examples using cage
. chipseq
for histone marks by ChIP-seq reads.
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