GUniFrac: Generalized UniFrac distances
Version 1.0

Generalized UniFrac distance for comparing microbial communities. Permutational multivariate analysis of variance using multiple distance matrices.

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AuthorJun Chen
Date of publication2012-04-28 18:47:09
MaintainerORPHANED
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GUniFrac")

Man pages

GUniFrac: Generalized UniFrac distances for comparing microbial...
GUniFrac-package: Generalized UniFrac distance for comparing microbial...
PermanovaG: Permutational multivariate analysis of variance using...
Rarefy: Rarefy the OTU table to an equal sequencing depth
throat.meta: Meta data of the throat microbiome samples.
throat.otu.tab: OTU count table from 16S sequencing of the throat microbiome...
throat.tree: UPGMA tree of the OTUs from 16S sequencing of the throat...

Functions

GUniFrac Man page Source code
GUniFrac-package Man page
PermanovaG Man page Source code
Rarefy Man page Source code
throat.meta Man page
throat.otu.tab Man page
throat.tree Man page

Files

NAMESPACE
data
data/throat.tree.rda
data/throat.meta.rda
data/throat.otu.tab.rda
R
R/GUniFrac.R
MD5
DESCRIPTION
man
man/throat.otu.tab.Rd
man/GUniFrac-package.Rd
man/throat.tree.Rd
man/throat.meta.Rd
man/GUniFrac.Rd
man/PermanovaG.Rd
man/Rarefy.Rd
GUniFrac documentation built on May 19, 2017, 10:01 a.m.