throat.otu.tab: Throat Microbiome OTU Count Table

Description Usage Details Source Examples

Description

It is part of a microbiome data set (16S V12-targeted 454 pyrosequencing) for studying the effect of smoking on the upper respiratory tract microbiome. The original data set contains samples from both throat and nose microbiomes, and from both body sides. This data set comes from the throat microbiome of left body side. It contains 60 subjects consisting of 32 nonsmokers and 28 smokers.

Usage

1

Details

The OTU table is produced by the QIIME software. Singleton OTUs have been discarded.

Source

Charlson ES, Chen J, Custers-Allen R, Bittinger K, Li H, et al. (2010) Disordered Microbial Communities in the Upper Respiratory Tract of Cigarette Smokers. PLoS ONE 5(12): e15216.

Examples

1

GUniFrac documentation built on Nov. 10, 2021, 9:09 a.m.