Man pages for GUniFrac
Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis
| adonis3 | Permutational Multivariate Analysis of Variance Using... |
| dICC | Distance-based Intra-Class Correlation Coefficient |
| dICC.SE.asympt | Asymptotic Standard Error of Distance-based Intra-Class... |
| dICC.SE.bt | Bootstrap Standard Error of Distance-based Intra-Class... |
| dmanova | Distance-based Multivariate Analysis of Variance (Analytical... |
| GMPR | Geometric Mean of Pairwise Ratios (GMPR) Normalization for... |
| GUniFrac | Generalized UniFrac distances for comparing microbial... |
| PermanovaG | Permutational Multivariate Analysis of Variance Using... |
| PermanovaG2 | Permutational Multivariate Analysis of Variance Using... |
| Rarefy | Rarefy a Count Table to Equal Sequencing Depth |
| SimulateMSeq | A Semiparametric Model-based Microbiome Sequencing Data... |
| SimulateMSeqC | A Semiparametric Model-based Microbiome Sequencing Data... |
| stool.otu.tab | Stool Microbiome OTU Count Table |
| throat.meta | Throat Microbiome Meta Data |
| throat.otu.tab | Throat Microbiome OTU Count Table |
| throat.tree | UPGMA Tree of Throat Microbiome OTUs |
| vaginal.otu.tab | Vaginal Microbiome OTU Count Table |
| ZicoSeq | A linear Model-based Permutation Test for Differential... |
| ZicoSeq.plot | A Plot Function for Visualizing the ZicoSeq Results |
