tf.list: The candidate pool of potential regulators

In GeneReg: Construct time delay gene regulatory network

Description

tf.list was constructed by intersecting the periodic genes and the transcription factors in YEASTRACT http://www.yeastract.com/.

Usage

data(tf.list)

Format

A list of potential regulators

Source

http://www.biology.duke.edu/haaselab/publicData/index.html

http://www.yeastract.com/

References

Orlando, D.A., Lin, C.Y., Bernard, A., Wang, J.Y., Socolar, J.E., Iversen, E.S., Hartemink, A.J. and Haase, S.B. (2008) Global control of cell-cycle transcription by coupled CDK and network oscillators, Nature, 453, 944-947.

Teixeira, M.C., Monteiro, P., Jain, P., Tenreiro, S., Fernandes, A.R., Mira, N.P., Alenquer, M., Freitas, A.T., Oliveira, A.L. and Sa-Correia, I. (2006) The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae, Nucleic acids research, 34, D446-451.

GeneReg documentation built on May 30, 2017, 6:07 a.m.